Description
A pyrimidine 2'-deoxyribonucleoside having uracil as the nucleobase.
Chemical properties
| Chemical formula | Net charge | Average mass |
|---|---|---|
| C9H12N2O5 | 0 | 228.20200 |
Recommended notation
| Name | 2'-deoxyuridine |
|---|---|
| Abbreviation | dU |
Nomenclature
| IUPAC | SMILES | InChI | InChIKey | Synonyms |
|---|---|---|---|---|
| 1-(2-deoxy-beta-D-erythro-pentofuranosyl)uracil | OC[C@H]1O[C@H](C[C@@H]1O)n1ccc(=O)[nH]c1=O | InChI=1S/C9H12N2O5/c12-4-6-5(13)3-8(16-6)11-2-1-7(14)10-9(11)15/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,15)/t5-,6+,8+/m0/s1 | MXHRCPNRJAMMIM-SHYZEUOFSA-N |
|
Mapping techniques
| Method |
Method detail
|
Resolution
|
Qualifier
|
References |
|---|---|---|---|---|
| Excision-seq |
|
XR-seq |
|
Nature
| Origin | Function | Functional detail |
Organisms
|
References |
|---|---|---|---|---|
| natural | Escherichia Coli |
|
Citations
- Bryan, DS, et al. 2014. High resolution mapping of modified DNA nucleobases using excision repair enzymes. Genome Research. 24(9).
- Hu, J, et al. 2015. Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution. Genes & Development. 29(9).
- Mohamed, S, et al. 2014. HPLC-UV analysis of thymidine and deoxyuridine in plasma of patients with thymidine phosphorylase deficiency. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 949-950.